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    Home » Recipes » 100+ Easy Low Carb Desserts

    Published: Mar 18, 2020 · Modified: Sep 11, 2020 by Jennifer Banz· 54 Comments

    Keto and Sugar Free Carrot Cake Cupcakes with Cream Cheese Frosting

    Servings: 12
    |
    Cals: 313
    |
    Fat: 28
    |
    Carbs: 7
    |
    Fiber: 3
    |
    Protein: 10
    |
    Time: 23 minutes mins
    Jump to Recipe Pin for Later

    This Keto and Sugar free Carrot Cake Cupcake recipe takes an American classic and makes it low carb and gluten free friendly.  One of my all time favorites.  A moist and perfectly spiced almond flour cupcake topped with a rich and creamy cream cheese icing.

    sugar free carrot cake cupcakes on a white platter

    If you grew up in America, you are familiar with carrot cake.  It is especially popular this time of year when Springtime is approaching.  Let us forget about our troubles for 1 hour and make keto carrot cake muffins!

    Perfectly spiced cupcakes with carrots

    Yes, carrots.  1 whole cup to be exact so it will not impact the carb count too much.  I used pre-shredded carrots from the grocery store but you can definitely shred your own.

    The pre-shredded carrots were a little thick so I pulsed them in a mini food processor.  You can see the texture I was left with in the photo below.

    carrot cake muffin ingredients in a glass bowl

    What's that sour cream in the bowl?  Actually, it is Greek Yogurt.

    I love the fluffiness I get in my muffins by adding Greek Yogurt and then using baking soda to lift them right up into fluffy pillows.

    This almond flour cupcake recipe is one I have been using for all of my keto muffins and cupcakes.  I love the results so it is easy to add different flavors for different results.  Like adding chocolate chips for my keto chocolate chip muffins, adding banana extract and walnuts for my keto banana bread muffins, adding blueberries to make keto blueberry muffins, and adding some spices and carrots for this sugar free carrot cake cupcake recipe.

    Alternative for almond flour

    Coconut flour is the common alternative but it is not my favorite.  It is like a sponge and the liquid ingredients would need to be increased to compensate so I do not recommend it.

    I have heard good things about sunflower seed flour being a good 1 for 1 substitute for almond flour.  If you have an almond allergy, be sure to try it out.

    This recipe makes 12 cupcakes and the batter is the perfect amount to fill each cupcake liner.

    A quick tip for cupcakes that peel right out of the liners - spray the insides with cooking spray!

    cupcake tin filled with batter

    Cream cheese frosting

    Do you call it frosting or icing?  I'm from the South so for me, it's icing!

    Sugar free carrot cake muffins require cream cheese icing, in my opinion.

    If you have a favorite cream cheese frosting recipe that uses only cream cheese, butter, vanilla, and sugar...simply replace the sugar with sugar free powdered sweetener and you are all set.

    That's all I did for this cream cheese frosting recipe and the results were perfect.

    I am no cupcake piping expert so my keto carrot cake cupcakes look nice and rustic.

    I made them prettier by topping them with a crumble made out of shredded carrot, chopped walnuts, and shredded carrots.

    carrot cake cupcakes on a plate one has a bite taken from it

    carrot cake cupcakes on a plate one has a bite taken from it

    Keto Carrot Cake Cupcakes with Cream Cheese Frosting

    Keto Carrot Cake Muffins - this bakery classic has a gluten free and sugar free twist. Perfectly spiced, super moist muffins topped with rich and creamy cream cheese frosting.
    4.96 from 23 votes
    Course: dinner
    Cuisine: American
    Prep Time: 5 minutes minutes
    Cook Time: 18 minutes minutes
    Total Time: 23 minutes minutes
    Servings: 12
    Calories: 313
    Author: Jennifer Banz

    This post may contain affiliate links

    Ingredients

    Muffins:

    • 2 ½ Cups almond flour (see my favorite on Amazon)
    • 1 teaspoon Baking soda
    • ¼ teaspoon Kosher salt
    • ½ Cup sugar free granulated sweetener (see my favorite on Amazon)
    • 3 Large eggs, beaten
    • 1 Cup Shredded carrots
    • 1 ½ teaspoon Cinnamon
    • ½ teaspoon Ground ginger
    • ¼ teaspoon Nutmeg
    • 8 oz Greek Yogurt
    • pinch of salt
    • 2 teaspoons Vanilla Extract

    Frosting:

    • 8 ounces Cream cheese, softened
    • ½ Cup Butter, softened
    • 1 teaspoon Vanilla
    • 1 cup sugar free powdered sweetener

    Garnish: (optional)

    • 1 Tablespoon sugar free granulated sweetener (see my favorite on Amazon)
    • 1 Tablespoon Walnuts
    • 1 Tablespoon Shredded carrots

    Instructions

    Muffins:

    • Preheat the oven to 400F and line a 12 cup muffin pan with liners. Spray the inside of the liners with cooking spray.
    • In a large mixing bowl, combine the almond flour, baking soda, salt, sweetener, vanilla cinnamon, ground ginger and nutmeg. Now add in the beaten eggs, greek yogurt and carrots. Mix well.
    • Scoop the batter into the muffin cups evenly using a scoop. Bake in the oven for 18 minutes or until a toothpick comes out clean. Cool completely before frosting

    Frosting:

    • In a medium size mixing bowl, whip the softened cream cheese and butter. Add in the sweetener ⅓ at a time until fully incorporated. Finally, add in the vanilla and beat until nice and smooth. Use a piping bag or the corner of a a zip top bag to frost your cupcakes.

    Garnish:

    • Combine sweetener, walnuts, and shredded carrots in a mini food processor and pulse for a few seconds. Just enough to combine all the ingredients together and to chop up carrots and walnuts. Alternatively, you can chop finely with a knife. Garnish on top of your muffins.

    Notes

    • Carrots: I used pre-shredded and then chopped them even more in a mini food processor.
    • Greek Yogurt: look for a plain Greek Yogurt that has the fewest carbs.  This is usually 7g per cup.  You can substitute sour cream but that will increase the calorie count.
    Servings: 12

    Nutrition per serving

    Calories: 313 | Carbohydrates: 7g | Protein: 10g | Fat: 28g | Fiber: 3g

    Nutrition is provided as a courtesy only. Please re-calculate on your own with the ingredients and amounts you used for the most accurate data.

    Keyword :gluten free, recipe for keto carrot cake

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    • keto lemon blueberry scones on white background
      Keto Lemon Blueberry Scones
    • keto chocolate no bake cookies
      Easiest Keto No Bake Cookies

    Reader Interactions

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      Recipe Reviews




    1. Lali says

      January 16, 2024 at 10:08 am

      5 stars
      My family and I absolutely loved this recipe!
      We used half the sweetener in the frosting, because we do not like things too sweet.
      It was so delicious!!!
      Thank you!!!

      Reply
    2. Debbie says

      September 27, 2023 at 8:57 pm

      5 stars
      These are the Best Carrot Cake muffins ever! You would never know they are Keto! I use sugar free Vanilla Greek yogurt, so, so good!

      Reply
    3. Andrea Cohen says

      August 30, 2023 at 3:07 pm

      5 stars
      This is my first rave on a food blog…but this is an outstanding recipe! I made it as a cake for a few Keto friends last night
      (where did my muffin pan go?)
      And it was absolutely as good as any carrot cake we’ve had-Keto or non. I added 1/2 cup pecans and 1/2 teaspoon cardamom to the batter and baked it in an 8.5” round pan with parchment on the bottom at 350° for 40 minutes.
      I used only half the sweetener in the icing.
      Great texture, outstanding flavor…a hit!

      Reply
    4. Suzanne says

      April 12, 2023 at 1:48 pm

      5 stars
      I added walnuts and a few golden raisins. I was able to make 18! They are so most and delicious! Thank you!

      Reply
    5. Safoora karim Karim says

      April 11, 2023 at 7:35 am

      Can we substitute sweetener with honey??

      Reply
      • jenniferbanz says

        April 11, 2023 at 11:12 am

        No sorry, that will not work. It needs to be a granulated sweetener.

        Reply
    6. Jill Fikkert says

      March 16, 2023 at 1:58 pm

      5 stars
      Delicious!!! Can they stay out for 2 to 3 days or do they need to be refrigerated?

      Reply
    7. Sharon says

      September 18, 2022 at 10:35 pm

      Hi do these freeze well?
      My father in law is in the hospital so we can only bring one every so often.
      I wanted to bake a few batches for my mother in law to store in her freezer and then bring one as needed
      Thanks 😊

      Reply
      • jenniferbanz says

        September 19, 2022 at 10:19 am

        Yes! I have frozen them very successfully!

        Reply
    8. Canela says

      September 01, 2022 at 12:25 pm

      Hello, is the nutrition facts for a single serve Cupcake?

      Reply
      • jenniferbanz says

        September 12, 2022 at 10:53 am

        yes

        Reply
    9. Olivia says

      August 18, 2022 at 3:23 pm

      5 stars
      Hi Jennifer,
      I have made MANY different types of keto GF muffins but this recipe is by far the best (even without the frosting for breakfast).
      What I love:
      -keto and gluten free
      -recipe makes a full dozen - no need to skimp on batter when filling the muffin cups (my pet peeve)
      -no butter or oil to mess with
      -texture and taste
      What I wish:
      -a vegan version so my vegan friends could experience this muffin! I’ve tried flax eggs or egg replacer in other muffin recipes and can’t get past the gumminess.

      Reply
      • jenniferbanz says

        August 22, 2022 at 10:22 am

        I do need to work on that. My husband has a very strong egg, gluten, and milk allergy!

        Reply
    10. Teresa says

      July 12, 2022 at 9:08 am

      What kind of Greek yogurt do you use?

      Reply
      • jenniferbanz says

        July 19, 2022 at 1:37 pm

        I use fate free plain Greek Yogurt. Either Oikos or Fage

        Reply
    11. Rosemary says

      April 13, 2022 at 7:35 pm

      5 stars
      Delicious!!! Unrelated question: do know of a good substitution for coconut flour? Thank you

      Reply
    12. Candi says

      March 25, 2022 at 2:28 pm

      5 stars
      These were amazing. Can you please let me know how to store them and how long they last?

      Reply
      • jenniferbanz says

        March 28, 2022 at 9:10 am

        I would store them in the fridge for up to 1 week.

        Reply
    13. Marrha says

      March 09, 2022 at 1:17 pm

      What about adding unsweetened applesauce?

      Reply
      • jenniferbanz says

        March 18, 2022 at 2:17 pm

        I am not sure as I haven't tried it. Let me know how it works!

        Reply
    14. Zulika says

      September 02, 2021 at 12:17 pm

      These are the best keto dessert EVER!!! I can’t wait to make different varieties….

      Reply
    15. El Hakim says

      August 28, 2021 at 4:21 pm

      5 stars
      Merciiii 🙏💐♥️

      Reply
    16. Sheila says

      August 25, 2021 at 7:51 pm

      5 stars
      Love the carrot cake cupcakes and icing! Big hit! Do you think I could bake this in 9 inch cake pans instead? How many layers would I get? How long to bake them and at what oven temp? Thank you, Jennifer!!

      Reply
    17. Meredith Monroe says

      July 03, 2021 at 7:23 pm

      These were amazing!!!

      Reply
    18. Barb says

      June 19, 2021 at 5:24 pm

      5 stars
      This is our go-to dessert for our family gatherings. Several folks are keto and a couple are gluten intolerant...Delicious and so satisfying. I've made them many times and they are always perfect. Thanks so much for the recipe

      Reply
    19. Christine says

      May 03, 2021 at 9:16 am

      5 stars
      Wasn't sure i could stick to keto but these have changed my mind. As good as any regular carrot cake and probably lighter. I added lemon essence to the frosting instead of vanilla. Gorgeous.

      Reply
    20. Kim Darnell says

      April 24, 2021 at 6:04 pm

      I am excited to try this ! I am adjusting the recipe for 7000ft. Altitude . Do you have any suggestions? I have adjusted the flour, sugar and baking soda. I wask wondering if I should add more Greek yogurt? Thank you !

      Reply
      • jenniferbanz says

        April 28, 2021 at 4:15 pm

        I am not sure, sorry I can't be of more help!

        Reply
    21. Sheila says

      April 21, 2021 at 9:19 pm

      5 stars
      Hubby approved! They were great! Easy to make- so moist! Just the exact right amount of carrot cake spice. I didn’t have Lakanto confectioners sweetener on hand to make icing, so I substituted Swerve confectioners sweetener! Wonderful! Put walnut half and tiny amt Lakanto granular on top of icing.Oh my! It was sooo good!!

      Reply
    22. Carol L says

      April 09, 2021 at 12:45 pm

      5 stars
      I made this for Easter. Everyone love it even the non low carb eaters. I did it in a loaf pan and baked for 45 minutes. I will definitely make again!

      Reply
    23. James says

      April 08, 2021 at 1:58 pm

      5 stars
      Came out Amazing!
      Thank You 😊

      Reply
    24. Layla says

      April 04, 2021 at 11:50 am

      4 stars
      There are delish and will be making them again 😋

      Reply
    25. Rose says

      March 08, 2021 at 1:33 pm

      5 stars
      Best keto carrot cupcakes ever from the texture of the dough to the final product, the taste everything is pure perfection. I will no longer search for another keto carrot cake recipe. The greek yogurt made a big difference.
      Thank you for sharing. I do appreciate you!

      Reply
    26. farah says

      February 08, 2021 at 9:19 am

      for non keto and non gluten intolerant people, can normal flour be used at the same amount?

      thanks!

      Reply
    27. Suzette says

      January 16, 2021 at 2:20 pm

      5 stars
      I have made these three times and they are sooo yummy! The third time I shredded the carrots extra fine and added a little flax meal as well as some raisins. I find they come out the best with extra fine almond flour over almond meal . Great recipe

      Reply
    28. Rachel Johnson says

      January 16, 2021 at 10:33 am

      Muffins sank!! Probably should have had baking soda in recipe.

      Reply
      • jenniferbanz says

        January 22, 2021 at 12:13 pm

        These do use baking soda

        Reply
    29. Tracy says

      October 20, 2020 at 12:17 am

      5 stars
      That was delicious! So fluffy and light, but moist too! Yummy. Thank you!

      Reply
      • Julia says

        December 03, 2020 at 8:27 pm

        5 stars
        This recipe is phenomenal!!!!
        I made these for my husband's birthday, he took a bite and asked, "are these real?". Lol. Like, this is really keto???
        Absolutely fantastic and will save recipe and use again and again and again.
        Thank you!!!

        Reply
    30. Brittany says

      September 23, 2020 at 9:36 pm

      5 stars
      These are amazing!

      How would you recommend to store them?

      Reply
    31. Michelle says

      September 19, 2020 at 10:53 am

      Did you use regular salted butter or unsalted?.

      Reply
      • jenniferbanz says

        September 21, 2020 at 9:12 am

        I use salted but I think it is a personal preference!

        Reply
    32. Jackie says

      August 05, 2020 at 9:35 am

      Hi
      Can the carrot cupcakes be frozen?

      Reply
      • jenniferbanz says

        August 07, 2020 at 11:05 am

        Definitely! I would flash freeze them on a plate for 2 hours

        Reply
    33. Lola gonzalez says

      July 25, 2020 at 4:10 pm

      Hi Jennifer
      I’ve made your broccoli cheese soup and chocolate cupcakes with the buttercream frosting and my husband and I loved them. I will be making other of your recipes, not disappointed yet! I follow keto eating style for a year now and love it. I will soon make your carrot cake muffins. Thank you

      Reply
    34. Judy says

      June 17, 2020 at 11:47 am

      question

      For the frosting recipe I only have swerve confectioners on hand . How much should I use -1 cup or does it need to be less?

      Thanks

      Reply
      • jenniferbanz says

        June 22, 2020 at 11:00 am

        Yes, 1 cup

        Reply
    35. Debbie Pryer says

      May 09, 2020 at 5:08 pm

      Can you bake this as a cake instead of cupcakes?

      Reply
      • jenniferbanz says

        May 11, 2020 at 9:48 am

        I think that would work! Use a loaf pan and bake for 30-45 minutes until a toothpick comes out clean

        Reply
    36. Jenny S Graves says

      April 14, 2020 at 9:28 am

      5 stars
      I am making these today, they look amazing!

      Reply
    37. Veena Azmanov says

      April 11, 2020 at 4:26 am

      5 stars
      Delicious, healthy and amazing ingredients. Best time to try your recipe for Easter tomorrow.

      Reply
    38. selina says

      April 08, 2020 at 12:05 pm

      Hi Jennifer, i recently discovered your site... i made a few recipes and have not been disappointed yet- they are so simple to make- I made these muffins and took the cheesecake idea from your pumpkin cheesecake muffins and they were delicious- non Keto eaters approve of them- Keep the recipes coming- Thank you...

      Reply
    39. Venice says

      March 27, 2020 at 2:08 pm

      Can Adding sweetener affect consistency? Thanks

      Reply
      • jenniferbanz says

        March 28, 2020 at 1:53 pm

        Do you mean more sweetener? That shouldn't be a problem

        Reply

    Primary Sidebar

    Jennifer holding her book

    Hey there, I'm Jennifer Banz! I’m the creator behind Low Carb with Jennifer and author of the cookbook Live Life Keto.  

    I've been cooking and developing low carb and keto recipes for the past 13 years and it is my goal to bring you the best quality recipes and cooking tutorials possible.

    My recipes reflect my philosophy on cooking...everything needs to be easy, fast, exceptionally delicious, and use common ingredients.

    More about me →

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